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Computational Medicine publications

On the Upper Bounds of the Real-Valued Predictions
SeqFu: A suite of utilities for the robust and reproducible manipulation of sequence files
Necroptosis-driving genes RIPK1, RIPK3 and MLKL-p are associated with intratumoral CD3+ and CD8+ T cell density and predict prognosis in hepatocellular carcinoma
An antisymmetric neural network to predict free energy changes in protein variants
Context dependency of nucleotide probabilities and variants in human DNA
Evaluating the relevance of sequence conservation in the prediction of pathogenic missense variants
Prenatal exposure to PM10and changes in DNA methylation and telomere length in cord blood
Predicting protein stability changes upon single-point mutation: a thorough comparison of the available tools on a new dataset
A Deep-Learning Sequence-Based Method to Predict Protein Stability Changes Upon Genetic Variations
Temporal transcriptome analysis reveals dynamic gene expression patterns driving β-cell maturation
ThermoScan: Semi-automatic Identification of Protein Stability Data From PubMed
Birthweight DNA methylation signatures in infant saliva
MiR-200c-3p contrasts PD-L1 induction by combinatorial therapies and slows proliferation of epithelial ovarian cancer through downregulation of β-catenin and c-Myc
Atrial Fibrillation after orthotopic heart transplantatation: Pathophysiology and clinical impact
Protein Stability Perturbation Contributes to the Loss of Function in Haploinsufficient Genes
Calibrating variant-scoring methods for clinical decision making
Current cancer driver variant predictors learn to recognize driver genes instead of functional variants
Limitations and challenges in protein stability prediction upon genome variations: towards future applications in precision medicine
Determination of saliva epigenetic age in infancy, and its association with parental socio-economic characteristics and pregnancy outcomes
DNA sequence symmetries from randomness: the origin of the Chargaff's second parity rule
On the critical review of five machine learning-based algorithms for predicting protein stability changes upon mutation
Differentially methylated DNA regions in early childhood wheezing: An epigenome-wide study using saliva
DDGun: an untrained method for the prediction of protein stability changes upon single and multiple point variations
Fido-SNP: the first webserver for scoring the impact of single nucleotide variants in the dog genome
On the biases in predictions of protein stability changes upon variations: the INPS test case

Publications

TESEO Traguardi di Eccellenza nelle Scienze mediche Esplorando le Omiche - Dept. of Medical Sciences – University of Torino - Corso Dogliotti, 14 – 10126 Torino Email: franco.veglio@unito.it - ricerca.medtorino@unito.it

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